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1. Zhou J, Park CY, Theesfeld CL, Wong AK, Yuan Y, Scheckel C, Fak JJ, Funk J, Yao K, Tajima Y, Packer A, Darnell RB, Troyanskaya OG   Whole-genome deep-learning analysis identifies contribution of noncoding mutations to autism risk   NATURE GENETICS 2019 JUN; 51(6):973-980 Full Text | PMID/PMCID

2. Frank MO, Koyama T, Rhrissorrakrai K, Robine N, Utro F, Emde AK, Chen BJ, Arora K, Shah M, Geiger H, Felice V, Dikoglu E, Rahman S, Fang A, Vacic V, Bergmann EA, Vogel JLM, Reeves C, Khaira D, Calabro A, Kim D, Lamendola-Essel MF, Esteves C, Agius P, Stolte C   Sequencing and curation strategies for identifying candidate glioblastoma treatments   BMC MEDICAL GENOMICS 2019 APR 25; 12(?):? Article 56 Full Text | PMID/PMCID

3. Saito Y, Yuan Y, Zucker-Scharff I, Fak JJ, Jereb S, Tajima Y, Licatalosi DD, Darnell RB   Differential NOVA2-Mediated Splicing in Excitatory and Inhibitory Neurons Regulates Cortical Development and Cerebellar Function   NEURON 2019 FEB 20; 101(4):707-720.e5 Full Text | PMID/PMCID

4. Ule J, Hwang HW, Darnell RB   The Future of Cross-Linking and Immunoprecipitation (CLIP)   COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY 2018 AUG; 10(8):? Article a032243 Full Text | PMID/PMCID

5. Yuan Y, Xie S, Darnell JC, Darnell AJ, Saito Y, Phatnani H, Murphy EA, Zhang CL, Maniatis T, Darnell RB   Cell type-specific CLIP reveals that NOVA regulates cytoskeleton interactions in motoneurons   GENOME BIOLOGY 2018 AUG 15; 19(?):? Article 117 Full Text | PMID/PMCID

6. Mak ACY, White MJ, Eckalbar WL, Szpiech ZA, Oh SS, Pino-Yanes M, Hu DL, Goddard P, Huntsman S, Galanter J, Wu AC, Himes BE, Germer S, Vogel JM, Bunting KL, Eng C, Salazar S, Keys KL, Liberto J, Nuckton TJ, Nguyen TA, Torgerson DG, Kwok PY, Levin AM, Celedon JC   Whole-Genome Sequencing of Pharmacogenetic Drug Response in Racially Diverse Children with Asthma   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE 2018 JUN 15; 197(12):1552-1564 Full Text | PMID/PMCID

7. Orange DE, Agius P, DiCarlo EF, Robine N, Geiger H, Szymonifka J, McNamara M, Cummings R, Andersen KM, Mirza S, Figgie M, Ivashkiv LB, Pernis AB, Jiang CS, Frank MO, Darnell RB, Lingampali N, Robinson WH, Gravallese E, Bykerk VP, Goodman SM, Donlin LT   Identification of Three Rheumatoid Arthritis Disease Subtypes by Machine Learning Integration of Synovial Histologic Features and RNA Sequencing Data   ARTHRITIS & RHEUMATOLOGY 2018 MAY; 70(5):690-701 Full Text | PMID/PMCID

8. Moore MJ, Blachere NE, Fak JJ, Park CY, Sawicka K, Parveen S, Zucker-Scharff I, Moltedo B, Rudensky AY, Darnell RB   ZFP36 RNA-binding proteins restrain T cell activation and anti-viral immunity   ELIFE 2018 MAY 31; 7(?):? Article e33057 Full Text | PMID/PMCID

9. Darnell RR, Ke S, Darnell JE   Pre-mRNA processing includes N-6 methylation of adenosine residues that are retained in mRNA exons and the fallacy of "RNA epigenetics"   RNA 2018 MAR; 24(3):262-267 Full Text | PMID/PMCID

10. Jereb S, Hwang HW, Van Otterloo E, Govek EE, Fak JJ, Yuan Y, Hatten ME, Darnell RB   Differential 3 ' Processing of Specific Transcripts Expands Regulatory and Protein Diversity Across Neuronal Cell Types   ELIFE 2018 MAR 26; 7(?):? Article e34042 Full Text | PMID/PMCID

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